PUBLICATIONS

2017 Publications
  1. Pallavi B, Shashi Kiran Nivas, L. D’Souza, Ganapathi T.R, Smitha Hegde (2017) Gamma radio sensitivity studies in Zinnia elegansvar Dreamland. (In Press)
  2. Adesiji Y, Santhosh Shivakumaraswamy, Deekshit V, Girisha S.K., Karunasagar I. (2017) Molecular characterization of antimicrobial multi-drug resistance in non-typhoidal Salmonellae from chicken and clam in Mangalore, India. Journal of Biomedical Research, 2017 0(0): 1–8. (In Press)
  3. Severesa A, Hegdeb S, D'Souzaa L, Hegde S. (2017). Use of light emitting diodes (LEDs) for enhanced lipid production in microalgae based biofuels. Journal of Photochemistry & Photobiology, B: Biology 170; 235–240 (IF: 3.005)
  4. Gürtler, V., Grando, D., Krishna, K., Maiti, B., Karunasagar, I., Karunasagar, I. (2017) Corrigendum to “The use of recombined ribosomal RNA operon (rrn) type-specific flanking genes to investigate rrn differences between Vibrio parahaemolyticus environmental and clinical strains.” [Gene Rep. 4 (2016) 16–25]. Gene Reports 6:163. doi: 10.1016/j.genrep.2016.10.001
  5. Kogaluru Shivakumaraswamy S, Vijaya Kumar D, Moleyuru Nagarajappa V, Karunasagar I, Karunasagar I (2017) Multiple antimicrobial resistance and novel point mutation in quinolone-resistant Escherichia coli isolates from Mangalore, India. Microbial Drug Resistance, doi: 10.1089/mdr.2016.0142. (I.F 2.529)
  6. Lucy M. Turner, Ramachandra Bhatta, Louise Eriander, Lena Gipperth, Kerstin Johannesson, AlinKadfak, Iddya Karunasagar, Indrani Karunasagar, Per Knutsson, Kristjan Laas, Per-Olav Moksnes and Anna Godhe (2017) Transporting ideas between marine and social sciences: experiences from interdisciplinary research programs. Elem SciAnth, 5: 14, DOI: https://doi.org/10.1525/elementa.148.
2016 Publications
  1. Letourneau M, Lapraz F, Sharma A,Vanzo N, Waltzer L, Crozatier M. (2016) Drosophila hematopoiesis under normal conditions and in response to immune stress. FEBS Letters 590:4034-4051. doi: 10.1002/1873-3468.12327. (IF:3.519)
  2. Saurabh Dubey, Kiran Avadhani, Srinivas Mutalik, Sangeetha Madambithara Sivadasan, Biswajit Maiti, Shivani Kallappa Girisha, Moleyur Nagarajappa Venugopal, Stephen Mutoloki, Øystein Evensen, Indrani Karunasagar and Hetron Mweemba Munang′andu(2016) Edwardsiella tarda OmpA Encapsulated in Chitosan Nanoparticles Shows Superior Protection over Inactivated Whole Cell Vaccine in Orally Vaccinated Fringed-Lipped Peninsula Carp (Labeo fimbriatus). Vaccines, 4(4), 40; doi:10.3390/vaccines4040040
  3. Lucy M. Turner, Christian Alsterberg, Andrew D. Turner, S. K. Girisha, Ashwin Rai, Jonathan N. Havenhand, M. N. Venugopal, Indrani Karunasagar & Anna Godhe (2016) Pathogenic marine microbes influence the effects of climate change on a commercially important tropical bivalve. Scientific Reports 6:32413 DOI: 10.1038/srep32413 (I.F 5.228)
  4. Rama Adiga. (2016) Phylogenetic Analysis of the NS5 Gene of Zika Virus. Journal of Medical Virology.doi 10.1002/jmv.24615.(I.F 2.373)
  5. Dubey, S., Avadhani, K., Mutalik, S., Sivadasan, S.M., Maiti, B., Paul, J., Girisha, S.K., Venugopal, M.N., Mutoloki, S., Evensen, Ø., Karunasagar, I., Munang'andu, H. M. (2016) Aeromonas hydrophila OmpW PLGA nanoparticle oral vaccine shows a dose dependent protective immunity in rohu (Labeorohita). Vaccines 4(2):21. doi:10.3390/vaccines4020021.
  6. Iddya Karunasagar, Indrani Karunasagar, Pendru Raghunath (2016) Editorial: Ecology, Virulence and Detection of Pathogenic and Pandemic Vibrio parahaemolyticus. Frontiers in Microbiology.7:156. doi: 10.3389/fmicb.2016.00156 (I.F 4.165)
  7. Indrani Karunasagara, Iddya Karunasagar (2016) Challenges of food security–need for interdisciplinary collaboration. Procedia Food Science 6 (2016) 31-33. doi: 10. 1016 /j.profoo. 2016.02.005
  8. B.K. Kumar, V.K Deekshit, P. Rai, I. Karunasagar (2016) Genome sequencing of seafood-borne Vibrio parahaemolyticus VP49 reveals the presence of novel virulence attributes. Procedia Food Science 6 (2016) 331–333. doi: 10.1016/ j.profoo.2016.02.066
  9. V. K. Deekshit, B. K. Kumar, P. Rai, I. Karunasagar. (2016) Antibiotic resistance and molecular characterization of seafood isolates of non-typhoidal Salmonella by PFGE. Procedia Food Science 6 (2016) 334 – 338. doi: 10.1016/j.profoo.2016.02.067.
  10. Gürtler, V., Grando, D., Krishna, K., Maiti, B., Karunasagar, I., Karunasagar, I. (2016) The use of recombined ribosomal RNA operon (rrn) type-specific flanking genes to investigate rrn differences between Vibrio parahaemolyticus environmental and clinical strains. Gene Reports 4:16-25. DOI:10.1016/j.genrep.2016.02.006
  11. Rohit, A., Maiti, B., Shenoy, S.M., Karunasagar, I. (2016) A comparative study of BacT/Alert blood culture system and polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) for rapid diagnosis of neonatal sepsis. Indian Journal of Medical Research 143(1):72-78. doi:10.4103/0971-5916.178613 (IF: 1.4).
2015 Publications
  1. H. A. Darshanee Ruwandeepika, Indrani Karunasagar, Peter Bossier, Tom Defoirdt (2015) Expression and Quorum Sensing Regulation of Type III Secretion System Genes of Vibrio harveyi during Infection of Gnotobiotic Brine Shrimp. PLoS ONE, 10(12): e0143935. doi:10.1371/journal.pone.0143935. (I.F 3.234) 19. Anuj Tyagi, Niraj K. Singh, Volker Gurtler, Indrani Karunasagar. (2015). Bioinformatics analysis of codon usage patterns and influencing factors in Penaeus monodon nudivirus. Archives of Virology. doi:10.1007/s00705-015-2689-3. (IF: 2.255)
  2. Anusha Rohit, Ballamoole Krishna Kumar, Vijay Kumar Deekshit, Praveen Rai, Ramanathan Vijay Kumar, JayapalanJayaprakash, Bhat Madhushankara, Iddya Karunasagar, Indrani Karunasagar. (2015). Draft Genome Sequence of Campylobacter fetus MMM01, Isolated from a Chronic Kidney Disease Patient with Sepsis. Genome Announcement. 3(5):e01055-15. doi:10.1128/genomeA.01055-15. (I.F 3.0)
  3. Devivaraprasad Reddy A, Subrahmanyam G, Naveen Kumar, S., Karunasagar I, Karunasagar I. (2015). Isolation of ammonia-oxidizing bacteria (AOB) from fish processing effluents. National Academy of Science Letters. (September-October 2015) 38(5):393-397. doi:10.1007/s40009-015-0363-7.(I.F 0.60)
  4. Vijaya Kumar Deekshit, Krishna Kumar Ballamoole, Praveen Rai, Madhushankara, Iddya Karunasagar, Indrani Karunasagar. (2015). Draft Genome Sequence of Multidrug Resistant Salmonella entericaserovar Weltevreden Isolated from Seafood. Journal of Genomics. 2015; 3: 57-58. doi: 10.7150/jgen.11253.(I.F 3.327)
  5. Banerjee, D., Maiti B., ShivaniKallappa G., Venugopal MN, Karunasagar I. (2015) A crustin isoform from black tiger shrimp, Penaeus monodon exhibits broad spectrum anti-bacterial activity. Aquaculture Reports. 2:106-111. doi:10.1016/j.aqrep.2015. 08.009 (I.F 1.5)
  6. Prakash, B., Shekar, M., Maiti B., Karunasagar, I., Padiyath, S. (2015) Prevalence of Candida spp. among healthy denture and non-denture wearers with respect to hygiene and age. The Journal of Indian Prosthodontic Society. 15(1):86-89. doi: 10.4103/0972-4052.155041. (I.F 0.6)
  7. Banerjee, D., Maiti, B., Girisha, S. K., Venugopal, M.N., Karunasagar, I. (2015) Broad spectrum anti-bacterial activity of a recombinant phosphatase-like protein isolated fromthe shrimp Penaeus monodon. The Israeli Journal of Aquaculture - Bamidgeh, IJA_67.1146.(I.F 0.424)
  8. Dechamma, M.M., Moger, R., Maiti, B., Mani, M.K., Karunasagar, I. (2015) Expression of toll- like receptors (TLR), in lymphoid organ of black tiger shrimp (Penaeus monodon) in response to Vibrio harveyi infection. Aquaculture Reports, 1:1-4. doi:10.1016/j.aqrep.2015.02.002.
  9. V.K. Deekshit, B.K. Kumar, P. Rai, I.Karunasagar and I. Karunasagar. (2015) “Differential expression of virulence genes and role of gyrA mutations in quinolone resistant and susceptible strains of Salmonella Weltevreden and Newport isolated from seafood”. Journal of Applied Microbiology Vol.119 No.4, pp.970-980, September, 2015, ISSN 1364-5072 (I.F 2.48)
  10. Anirban Chakraborty and Indrani Karunasagar. Faulty ribosomes and human diseases: mistakes in “assemble line” going unnoticed? NUJHS Vol.5, No: 3, September, 2015, ISSN 2249-7110. Shivarama Bhat, Muhammad Asif, Dinesh SosalagereManjegowda, Shetty Radhakrishna and Shivarama C.H. Rhomboid fossa and mid shaft circumference of the clavicle-anthropological study in North Karnataka population. NUJHS Vol.5, No: 3, September, 2015, ISSN 2249-7110.
  11. Divyashree M, Shama Prakash K, Veena Shetty A, Karunasagar I. (2015). Antibiotic Resistance in Extended-Spectrum Beta-Lactamase-Producing Escherichia Coli Isolated from Effluents of Tertiary Care Hospitals. International Journal of Health Sciences and Research. 5 (12):27-33. (I.F 3.5)
  12. M. Divyashree, Malathi Shekar, K. Shama Prakash, M. N. Venugopal, I. Karunasagar A. Veena Shetty. (2015). Characterization of Extended Spectrum β-Lactamase Producing and Non-Producing Escherichia coli Isolated from Hospital and Fish Processing PlantUntreated Wastewaters. Int.J.Current Microbiology and Applied Sciences. 4(10): 179-189. (I.F 0.6)
  13. Devivaraprasad Reddy A, Subrahmanyam G, Naveen Kumar, S., Karunasagar I, Karunasagar I. (2015). Isolation of ammonia-oxidizing bacteria (AOB) from fish processing effluents. National Academy of Science Letters. (September-October 2015) 38(5):393-397. doi:10.1007/s40009-015-0363-7. (I.F. 1.4)
  14. ThejaswiniVenkatesh, Padmanaban S. Suresh, RieTsutsumi. (2015). Non-coding RNAs: Functions and applications in endocrine-related Cancer. Molecular and Cellular Endocrinology. (1-9). doi.org/10.1016/j.mce.2015.08.026 1e9 (I.F 3.611)
  15. D.S Akhila., M.K Mani., P Rai., K Condon., L Owens., and Karunasagar I. (2015). Antisense RNA mediated protection from white spot syndrome virus (WSSV) infection in Pacific white shrimp Litopenaeus vannamei. Aquaculture 435 (2015) 306-309. doi/10.1016/j.aquaculture.2014.10.005. (I.F 1.878)
  16. Adiga R and Adiga R. (2015). Bioinformatics based analysis of Microarrays in Human Bipolar Disorder. International journal of Innovative Research in Computer and Communication Engineering, 3:261-266. 35. Vineesh Indira Chandran, SerenellaEppenberger-Castori, ThejaswiniVenkatesh, Kara Lea Vine, Marie Ranson. (2015). HER2 and uPAR cooperativity contribute to metastatic phenotype of HER2-positive breast cancer. Oncoscience, 2:207-224 ((I.F 6.154)
  17. Veerappa AM, Vishweswaraiah S, Lingaiah K, Murthy M, Suresh RV, Manjegowda DS, Nallur B. Ramachandra (2015) Global Spectrum of Copy Number Variations Reveals Genome Organizational Plasticity and Proposes New Migration Routes. PLoS ONE 10(4):e0121846. doi:10.1371/journal.pone.0121846.
  18. Avinash MV, Raviraj VS, Sangeetha V, Kusuma L, Megha MN, Dinesh SM, Prakash P and Nallur BR (2015). Global patterns of large copy number variations in the human genome reveal complexity in chromosome organization. Genetic research, Cambridge. 97, e18 doi:10.1017/S0016672315000191. (IF 2.2)
  19. D. S. Manjegowda, P. Karunakar, N. B. Ramachandra (2015) Effect of structural changes in proteins derived from GATA4 non-synonymous single nucleotide polymorphisms in congenital heart disease. Indian J Pharm Sci 2015;77(6):735-741.
  20. Kempaller Vinayak J., Kiran K. G, Shruthi Shetty M., Patil Sandeep, Kiran N Udaya., Manjegowda Dinesh S (2015). A cross sectional study on pattern of tobacco consumption and prevalence of passive smoking and its health hazard awareness among elderly patients-a Coastal Karnataka study. Journal of Advance Researches in Biological Sciences, 2015, Vol. 7 (1) 5-10.
2014 Publications
  1. Adiga R (2014). Impact of Computers on Structural Biology of Proteins (2014). International Journal of Innovative Research in Computer and Communication Engineering. 2 (5) 248-250.
  2. Henras A., Plisson-Chastang C., O'Donohue M-F, Anirban Chakraborty, Gleizes P-E. 2014. Anoverview of pre-ribosomal RNA processing in eukaryotes. Wiley Interdisciplinary Reviews: RNA, (Article first published online: 27 Oct, 2014),doi: 10.1002/wrna.1269 (I.F 6.154)
  3. Owens L, Condon K, Rai P, Karunasagar I. 2014.Diet-delivery of therapeutic RNA interference in live Escherichia coli against pre-existing Penaeus merguiensishepandensovirus in Penaeus merguiensis. Aquaculture 437:360-365. doi: 10.1016/j.aquaculture.2014.12.014. (I.F 1.878)
  4. Volker Gurtler, GangavarapuSubrahmanyam, MalathiShakar, Biswajit Maiti, Indrani Karunasagar. (2014) Bacterial typing and identification by genomic analysis of 16S–23S rRNA intergenic spacer (ITS) sequences. Methods in Microbiology 41, 253–274
  5. Dinesh SM, Manu Prasad, Avinash MV and Nallur BR (2014). Genome-wide copy number scan identifies IRF6 involvement in Van der Woude syndrome in an Indian family. Genetic Research 96, e12 doi:10.1017/S0016672314000159. (I.F 2.2)
  6. vinash MV, Megha MN, Sangeetha V, Kusuma L, Raviraj VS, Somanna AN, Nelchi P, Sangeetha NY, Manjula AS, Dinesh SM, Keshava BS and Nallur BR (2014). Copy Number Variations Burden on miRNA Genes Reveals Layers of Complexities Involved in the Regulation of Pathways and Phenotypic Expression. PLoS ONE 9(2): e90391. doi:10.1371/journal.pone.0090391 (IF 3.53)
  7. Avinash MV, Kusuma L, Megha MN, Sangeetha V, Raviraj VS, Dinesh SM, and Nallur BR (2014). Impact of Copy Number Variations Burden on Coding Genome in HumansUsing Integrated High Resolution Arrays. Genetic Research, Camb.96, e17. doi:10.1017/S0016672314000202 (IF 2.2).